species:   Scscl
pid:       PID0067
parent:    SS-milR-C23
paralog:   
locus:     Supercontig_2.8:452430-452530
matures:   ['UAUGAACGUUUCAGAUUGCUAA', 'GGUAAUUUGAGGUAUAUA']
srr:       SRR189065
genome:    /Users/jax/+Genomes/Fungal_genomes/Scscl.sclerotinia_sclerotiorum_2_supercontigs.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zhou2012-iu.SRR189065.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zhou2012-iu.SRR189065.cram Supercontig_2.8:452430-452530

0 out of bounds
0 alignments
0 proper strand
0 stranded perfect matches

        ************************                                          ********************       
UUGAUCAUUAUAUGAACGUUUCAGAUUGCUAAAACAGCCAAUAUCAAGUGGUUGAGUUAAAUGACUUGAAUGUGGUGGUAAUUUGAGGUAUAUAAUAUCAU
.((((.((((((((....((((((((((((......((((...((((((.(((......))).))))))...)))))))))))))))))))))))))))).
----------UAUGAACGUUUCAGAUUGCUAA--------------------------------------------------------------------- l=22 a=0 c
----------------------------------------------------------------------------GGUAAUUUGAGGUAUAUA------- l=18 a=0 c*
----------UAUGAACGUUUCAGAUUGCUAA--------------------------------------------------------------------- l=22 a=0 ma
----------------------------------------------------------------------------GGUAAUUUGAGGUAUAUA------- l=18 a=0 ma*


No alignments to locus

mb-01011
ax-1011011
ku-01
ss-000110011000
fn-001
